SUPR-G

Publications

2020

Herdt, O., Reich, S., Medenbach, J., Timmermann, B., Olofsson, D., Preussner, M. and Heyd, F. (2020). "The zinc finger domains in U2AF26 and U2AF35 have diverse functionalities including a role in controlling translation." Rna Biology: 1-14. www.ncbi.nlm.nih.gov/pubmed/32116123.

Kurniawan, H., Franchina, D. G., Guerra, L., Bonetti, L., - Baguet, L. S., Grusdat, M., Schlicker, L., Hunewald, O., Dostert, C., Merz, M. P., Binsfeld, C., Duncan, G. S., Farinelle, S., Nonnenmacher, Y., Haight, J., Das Gupta, D., Ewen, A., Taskesen, R., Halder, R., Chen, Y., Jäger, C., Ollert, M., Wilmes, P., Vasiliou, V., Harris, I. S., Knobbe-Thomsen, C. B., Turner, J. D., Mak, T. W., Lohoff, M., Meiser, J., Hiller, K. and Brenner, D. (2020). "Glutathione Restricts Serine Metabolism to Preserve Regulatory T Cell Function." Cell Metab 31(5): 920–936.e927. doi.org/10.1016/j.cmet.2020.03.004.

Reich, S., Nguyen, C. D. L., Has, C., Steltgens, S., Soni, H., Coman, C., Freyberg, M., Bichler, A., Seifert, N., Conrad, D., Knobbe-Thomsen, C. B., Tews, B., Toedt, G., Ahrends, R. and Medenbach, J. (2020). "A multi-omics analysis reveals the unfolded protein response regulon and stress-induced resistance to folate-based antimetabolites." Nature Communications 11(2936): 1–15. doi.org/10.1038/s41467-020-16747-y.

Soni, H., Bode, J., Nguyen, C. D. L., Puccio, L., Nessling, M., Piro, R. M., Bub, J., Phillips, E., Ahrends, R., Eipper, B. A., Tews, B. and Goidts, V. (2020). "PERK-mediated expression of peptidylglycine alpha-amidating monooxygenase supports angiogenesis in glioblastoma." Oncogenesis 9(2): 16. www.ncbi.nlm.nih.gov/pubmed/32054826.

2019

Breckwoldt, M. O., Bode, J., Sahm, F., Kruwel, T., Solecki, G., Hahn, A., Wirthschaft, P., Berghoff, A. S., Haas, M., Venkataramani, V., von Deimling, A., Wick, W., Herold-Mende, C., Heiland, S., Platten, M., Bendszus, M., Kurz, F. T., Winkler, F. and Tews, B. (2019). "Correlated MRI and Ultramicroscopy (MR-UM) of Brain Tumors Reveals Vast Heterogeneity of Tumor Infiltration and Neoangiogenesis in Preclinical Models and Human Disease." Front Neurosci 12: 1004. www.ncbi.nlm.nih.gov/pubmed/30686972.

Moschall, R., Rass, M., Rossbach, O., Lehmann, G., Kullmann, L., Eichner, N., Strauss, D., Meister, G., Schneuwly, S., Krahn, M. P. and Medenbach, J. (2019). "Drosophila Sister-of-Sex-lethal reinforces a male-specific gene expression pattern by controlling Sex-lethal alternative splicing." Nucleic Acids Res 47(5): 2276-2288. www.ncbi.nlm.nih.gov/pubmed/30590805.

Muller-McNicoll, M., Rossbach, O., Hui, J. Y. and Medenbach, J. (2019). "Auto-regulatory feedback by RNA-binding proteins." Journal of Molecular Cell Biology 11(10): 930-939. www.ncbi.nlm.nih.gov/pubmed/31152582.

Nguyen, C. D. L., Malchow, S., Reich, S., Steltgens, S., Shuvaev, K. V., Loroch, S., Lorenz, C., Sickmann, A., Knobbe-Thomsen, C. B., Tews, B., Medenbach, J. and Ahrends, R. (2019). "A sensitive and simple targeted proteomics approach to quantify transcription factor and membrane proteins of the unfolded protein response pathway in glioblastoma cells." Sci Rep 9(1): 8836. www.ncbi.nlm.nih.gov/pubmed/31222112.

Urdaneta, E. C., Vieira-Vieira, C. H., Hick, T., Wessels, H. H., Figini, D., Moschall, R., Medenbach, J., Ohler, U., Granneman, S., Selbach, M. and Beckmann, B. M. (2019). "Purification of cross-linked RNA-protein complexes by phenol-toluol extraction." Nat Commun 10(1): 990. www.ncbi.nlm.nih.gov/pubmed/30824702.

Wilson, A. S., Law, H. D., Knobbe-Thomsen, C. B., Kearney, C. J., Oliaro, J., Binsfeld, C., Burgio, G., Starrs, L., Brenner, D., Randall, K. L. and Brustle, A. (2019). "Protection from EAE in DOCK8 mutant mice occurs despite increased Th17 cell frequencies in the periphery." Eur J Immunol 49(5): 770-781. www.ncbi.nlm.nih.gov/pubmed/30729501.

Wirthschaft, P., Bode, J., Soni, H., Dietrich, F., Kruwel, T., Fischer, B., Knobbe-Thomsen, C. B., Rossetti, G., Hentschel, A., Mack, N., Schonig, K., Breckwoldt, M. O., Schmandke, A., Pusch, S., Medenbach, J., Bendszus, M., Schwab, M. E., von Deimling, A., Kool, M., Herold-Mende, C., Reifenberger, G., Ahrends, R. and Tews, B. (2019). "RhoA regulates translation of the Nogo-A decoy SPARC in white matter-invading glioblastomas." Acta Neuropathol 138(2): 275-293. www.ncbi.nlm.nih.gov/pubmed/31062076.

2018

An, Z., Knobbe-Thomsen, C. B., Wan, X., Fan, Q. W., Reifenberger, G. and Weiss, W. A. (2018). "EGFR Cooperates with EGFRvIII to Recruit Macrophages in Glioblastoma." Cancer Research 78(24): 6785-6794. www.ncbi.nlm.nih.gov/pubmed/30401716.

Knüppel, R., Christensen, R. H., Gray, F. C., Esser, D., Strauß, D., Medenbach, J., Siebers, B., MacNeill, S. A., LaRonde, N. and Ferreira-Cerca, S. (2018). "Insights into the evolutionary conserved regulation of Rio ATPase activity." Nucleic Acids Research 46(3): 1441-1456. www.ncbi.nlm.nih.gov/pubmed/29237037.

Moschall, R., Strauss, D., García-Beyaert, M., Gebauer, F. and Medenbach, J. (2018). "Drosophila Sister-of-Sex-lethal is a repressor of translation." RNA (New York, N.Y.) 24(2): 149-158. www.ncbi.nlm.nih.gov/pubmed/29089381.

Wirthschaft, P., Bode, J., Simon, A. E. M., Hoffmann, E., van Laack, R., Krüwel, T., Dietrich, F., Bucher, D., Hahn, A., Sahm, F., Breckwoldt, M. O., Kurz, F. T., Hielscher, T., Fischer, B., Dross, N., Ruiz de Almodovar, C., von Deimling, A., Herold-Mende, C., Plass, C., Boulant, S., Wiestler, B., Reifenberger, G., Lichter, P., Wick, W. and Tews, B. (2018). "A PRDX1-p38α heterodimer amplifies MET-driven invasion of IDH-wildtype and IDH-mutant gliomas." International Journal of Cancer 143(5): 1176-1187. www.ncbi.nlm.nih.gov/pubmed/29582423.

2017

Kopczynski, D., Coman, C., Zahedi, R.P., Lorenz, K., Sickmann, A., Ahrends, R., 2017. Multi-OMICS: a critical technical perspective on integrative lipidomics approaches. Biochim. Biophys. Acta 1862, 808–811. doi.org/10.1016/j.bbalip.2017.02.003

Reifenberger, G., Wirsching, H.-G., Knobbe-Thomsen, C.B., Weller, M., 2017. Advances in the molecular genetics of gliomas - implications for classification and therapy. Nat. Rev. Clin. Oncol. 14, 434–452. doi.org/10.1038/nrclinonc.2016.204

Schwudke, D., Shevchenko, A., Hoffmann, N., Ahrends, R., 2017. Lipidomics informatics for life-science. J. Biotechnol. 261, 131–136. doi.org/10.1016/j.jbiotec.2017.08.010

2016

Beckmann, B.M., Castello, A., Medenbach, J., 2016. The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions. Pflugers Arch. 468, 1029–1040. doi.org/10.1007/s00424-016-1819-4

Coman, C., Solari, F.A., Hentschel, A., Sickmann, A., Zahedi, R.P., Ahrends, R., 2016. Simultaneous Metabolite, Protein, Lipid Extraction (SIMPLEX): A Combinatorial Multimolecular Omics Approach for Systems Biology. Mol. Cell Proteomics 15, 1453–1466. doi.org/10.1074/mcp.M115.053702

Schneider, T., Hung, L.-H., Schreiner, S., Starke, S., Eckhof, H., Rossbach, O., Reich, S., Medenbach, J., Bindereif, A., 2016. CircRNA-protein complexes: IMP3 protein component defines subfamily of circRNPs. Sci Rep 6, 31313. https://doi.org/10.1038/srep31313

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