DeepLTNBC

^{Ector, C., C. Schmal, J. Didier, S. De Landtsheer, A.-M. Finger, F. Müller-Marquardt, J. H. Schulte, T. Sauter, U. Keilholz, H. Herzel, A. Kramer, and A. E. Granada (2024). "Time-of-day effects of cancer drugs revealed by high-throughput deep phenotyping." Nature Communications 15(7205): 1–16. www.nature.com/articles/s41467-024-51611-3.}

^{Gabriel, C. H., M. del Olmo, A. Rizki Widini, R. Roshanbin, J. Woyde, E. Hamza, N.-N. Gutu, A. Zehtabian, H. Ewers, A. Granada, H. Herzel, and A. Kramer (2024). "Circadian period is compensated for repressor protein turnover rates in single cells." Proceedings of the National Academy of Sciences 121(34): e2404738121. doi.org/10.1073/pnas.2404738121.}

^{Butt, L., D. Unnersjoe-Jess, D. Reilly, R. Hahnfeldt, M. M. Rinschen, K. Bozek, B. Schermer, T. Benzing, and M. Hoehne (2023). "In vivo characterization of a podocyte-expressed short podocin isoform." Bmc Nephrology 24(1). DeepLTNBC  doi.org/10.1186/s12882-023-03420-x.}

^{Deserno, M., and K. Bozek (2023). "WormSwin: Instance segmentation of C. elegans using vision transformer." Sci Rep 13(11021): 1–11. DeepLTNBC  doi.org/10.1038/s41598-023-38213-7.}

^{Gutu, N., N. Binish, U. Keilholz, H. Herzel, and A. E. Granada (2023). "p53 and p21 dynamics encode single-cell DNA damage levels, fine-tuning proliferation and shaping population heterogeneity." Communications Biology 6(1): 1196. DeepLTNBC  doi.org/10.1038/s42003-023-05585-5.}

^{Pisula, J. I., R. R. Datta, L. B. Valdez, J.-R. Avemarg, J.-O. Jung, P. Plum, H. Löser, P. Lohneis, M. Meuschke, D. P. dos Santos, F. Gebauer, A. Quaas, A. Walch, C. J. Bruns, K. Lawonn, F. C. Popp, and K. Bozek (2023). "Predicting the HER2 status in oesophageal cancer from tissue microarrays using convolutional neural networks - British Journal of Cancer." Br J Cancer: 1–8. DeepLTNBC  doi.org/10.1038/s41416-023-02143-y.}

^{Unnersjö-Jess, D., L. Butt, M. Höhne, G. Sergei, A. Fatehi, A. Witasp, A. Wernerson, J. Patrakka, P. F. Hoyer, H. Blom, B. Schermer, K. Bozek, and T. Benzing (2023). "Deep learning–based segmentation and quantification of podocyte foot process morphology suggests differential patterns of foot process effacement across kidney pathologies." Kidney International 103(6): 1120–1130. DeepLTNBC  doi.org/10.1016/j.kint.2023.03.013.}

^{Vom Stein, A. F., R. Rebollido-Rios, A. Lukas, M. Koch, A. von Lom, S. Reinartz, D. Bachurski, F. Rose, K. Bozek, A. T. Abdallah, V. Kohlhas, J. Saggau, R. Zölzer, Y. Zhao, C. Bruns, P. J. Bröckelmann, P. Lohneis, R. Büttner, B. Häupl, T. Oellerich, P.-H. Nguyen, and M. Hallek (2023). "LYN kinase programs stromal fibroblasts to facilitate leukemic survival via regulation of c-JUN and THBS1." Nat Commun 14(1330): 1–22. DeepLTNBC  doi.org/10.1038/s41467-023-36824-2.}

Hanuscheck, N., C. Thalman, M. Domingues, S. Schmaul, M. Muthuraman, F. Hetsch, M. Ecker, H. Endle, M. Oshaghi, G. Martino, T. Kuhlmann, K. Bozek, T. van Beers, S. Bittner, J. von Engelhardt, J. Vogt, C. F. Vogelaar and F. Zipp (2022). "Interleukin-4 receptor signaling modulates neuronal network activity." J Exp Med 219(6). DeepLTNBC doi.org/10.1084/jem.20211887.

Tilley, D. O., U. Abuabed, U. Z. Arndt, M. Schmid, S. Florian, P. R. Jungblut, V. Brinkmann, A. Herzig and A. Zychlinsky (2022). "Histone H3 clipping is a novel signature of human neutrophil extracellular traps." eLife. DeepLTNBC doi.org/10.7554/eLife.68283.

Bozek, K., L. Hebert, Y. Portugal, A. S. Mikheyev and G. J. Stephens (2021). "Markerless tracking of an entire honey bee colony." Nat Commun 12(1733): 1–13. DeepLTNBC doi.org/10.1038/s41467-021-21769-1.

Finger, A. M., S. Jaschke, M. Del Olmo, R. Hurwitz, A. E. Granada, H. Herzel and A. Kramer (2021). "Intercellular coupling between peripheral circadian oscillators by TGF-beta signaling." Sci Adv 7(30). DeepLTNBC www.ncbi.nlm.nih.gov/pubmed/34301601.

Gabriel, C. H., M. del Olmo, A. Zehtabian, M. Jäger, S. Reischl, H. van Dijk, C. Ulbricht, A. Rakhymzhan, T. Korte, B. Koller, A. Grudziecki, B. Maier, A. Herrmann, R. Niesner, T. Zemojtel, H. Ewers, A. E. Granada, H. Herzel and A. Kramer (2021). "Live-cell imaging of circadian clock protein dynamics in CRISPR-generated knock-in cells " Nat Commun 12(3796): 1–15. DeepLTNBC doi.org/10.1038/s41467-021-24086-9.

Nguyen, D. M. T., M. L. Iuzzolino, A. Mankel, K. Bozek, G. J. Stephens and O. Peleg (2021). "Flow-mediated olfactory communication in honeybee swarms." Proceedings of the National Academy of Sciences 118(13). DeepLTNBC doi.org/10.1073/pnas.2011916118.

Kok, R. N. U., L. Hebert, G. Huelsz-Prince, Y. J. Goos, X. Zheng, K. Bozek, G. J. Stephens, S. J. Tans and J. S. van Zon (2020). "OrganoidTracker: Efficient cell tracking using machine learning and manual error correction." PLoS One 15(10): e0240802. DeepLTNBC doi.org/10.1371/journal.pone.0240802.

Lopes, A. F. C., K. Bozek, M. Herholz, A. Trifunovic, M. Rieckher and B. Schumacher (2020). "A C. elegans model for neurodegeneration in Cockayne syndrome." Nucleic Acids Res 48(19): 10973–10985. DeepLTNBC doi.org/10.1093/nar/gkaa795.

Mönke, G., F. A. Sorgenfrei, C. Schmal and A. E. Granada (2020). "Optimal time frequency analysis for biological data - pyBOAT." bioRxiv: 2020.2004.2029.067744. DeepLTNBC doi.org/10.1101/2020.04.29.067744.