Program
as at 2017-11-17
Detailed program: >>> download detailed program <<<
Tuesday, November 21, 2017
| Tue Nov 21 | Topic | Speaker |
|---|---|---|
10:00 - 11:00 am |
Breakout project group Informatics & Modelling |
Chair PG 1: Matthias Ganzinger |
11:00-01:00 pm |
Satellite Symposium: Technological Innovations |
Organized by PG Epigenetics & Sequencing. Chairs: Friedrich Feuerhake Karsten Rippe Philip Rosenstiel |
11:00 - 11:30 am |
Unraveling the tumor microenvironment architecture by multispectral imaging |
Angela Vasaturo, INSERM, Paris (sponsored by Perkin Elmer) |
11:30 - 12:00 pm |
Follow response to treatment by single-cell sequencing |
Philipp Mallm, DKFZ Heidelberg (sponsored by 10x Genomics) |
12:00 - 12:30 pm |
Unravelling cellular heterogeneity - a single cell biology approach |
Andreas Schlitzer, University of Bonn |
12:30 - 01:00 pm |
High resolution single cell analysis in complex adult tissues |
Stefan Günther, MPI Bad Nauheim (sponsored by WaferGen) |
01:00 - 01:45 pm |
Registration & welcome supper |
|
01:45 - 02:00 pm |
Welcome speech |
Tanja Zeller, Speaker e:Med PK Blanche Schwappach, UMG/Uni Göttingen Johannes Mohr, BMBF |
02:00 - 02:45 pm |
Visionary Talk: Design principles of circuits for tissue homeostasis |
Uri Alon, Weizmann Institute, Israel |
02:45 - 04:00 pm |
Session 1: Technologies in systems medicine |
Chairs: Philip Rosenstiel, Frank Kramer |
02:45 - 03:15 pm |
Keynote lecture: LEAN analysis biological network hot spots in the age of Big Data |
Benno Schwikowski Institut Pasteur, Paris |
03:15 - 03:30 pm |
Metabolomic changes in lymphoma in response to stromal stimuli |
Wolfram Gronwald University of Regensburg |
03:30 - 03:45 pm |
Spatial organization of B cells and T cells predicts loss of renal transplant function |
Katharina Nekolla Definiens AG, Munich |
03:45 - 04:00 pm |
Introducing the de.NBI Cloud – the novel compute and storage infrastructure for life sciences |
Chris Lawerenz DKFZ Heidelberg |
04:00 - 04:30 pm |
Coffee break |
|
04:30 - 06:30 pm |
Poster session 1 |
|
04:30 - 05:00 pm |
Poster flash talks (11 talks à 3 min) |
Chair: Ingo Röder |
05:00 - 06:30 pm |
Poster exhibition |
|
06:30 - 07:30 pm |
Public event: Karriere in der Systemmedizin |
Roberto Goya-Maldonado Frank Kramer Antje Walz Markus Nöthen Uri Alon |
07:45 - 10:00 pm |
Get together with wine & snacks networking at the venue |
Wednesday, November 22, 2017
| Wed Nov 22 | Topic | Speaker |
|---|---|---|
08:30 - 09:00 am |
Welcome coffee |
|
09:00 - 10:30 am |
Session 2: Systems Medicine in the European context |
Chair: Peter Lichter, Karsten Rippe |
09:00 - 09:30 am |
SYSCID – A Systems medicine approach to chronic inflammatory diseases |
Philip Rosenstiel Kiel University |
09:30 - 10:00 am |
German imaging science in European context |
Bernd Pichler University Hospital Tübingen |
10:00 - 10:30 am |
Medical Informatics Initiative and Systems Medicine Initiative – An opportunity not to miss – |
Markus Löffler University of Leipzig |
10:30 - 11:00 am |
Coffee break |
|
11:00 - 12:30 pm |
Session 3: Systems medicine of diseases |
Chair: Roberto Goya-Maldonado, Dagmar Kulms |
11:00 - 11:30 am |
Keynote lecture: Frontostriatal mechanisms of anhedonia in novel neurophysiological subtypes of depression |
Conor Liston, Weill Cornell Medicine, New York |
11:30 - 11:45 am |
Metabolomics in Translational Medicine – A Link between Acylcarnitines and Atrial Fibrillation |
Julia Krause University Medical Center Hamburg-Eppendorf, DZHK |
11:45 - 12:00 pm |
Reconstruction of tumor evolution from massively parallel sequencing data |
Nima Abedpour University of Cologne |
12:00 - 12:15 pm |
Transcriptomic landscape of Pancreatic Cancer and normal Epithelial and Stromal cells directly isolated from human samples reveals common and cell-type specific deregulated nodes |
Elisa Espinet HI-STEM & DKFZ Heidelberg |
12:15 - 12:30 pm |
Multi-omics analysis methods for the genetic diagnosis of rare diseases |
Vicente Yépez Technical University of Munich |
12:30 - 02:30 pm |
Lunch break |
|
01:00 - 01:30 pm |
Company session: Olink: A precision proteomics solution for targeted human protein biomarker discovery |
Martin Lundberg, Olink Proteomics |
01:40 - 02:10 pm |
Company Session: HMG Systems Engineering Clinical Implementation of Pharmacogenetics |
Ingolf Cascorbi, UKSH for HMG Systems Engineering |
02:30 - 04:00 pm |
Session 4: Modelling in systems medicine |
Chairs:Friedrich Feuerhake, Markus Löffler |
02:30 - 03:00 pm |
Keynote lecture From Ideas to Medicine – with Modelling and Simulation |
Antje Walz, Quantitative systems pharmacology Roche, Basel |
03:00 - 03:15 pm |
Predicting sensitivity of malignant melanoma to combination therapies by network modeling |
Dagmar Kulms TU Dresden |
03:15 - 03:30 pm |
A drug - cytokine interaction map for lympho-proliferative disorders |
Peter-Martin Bruch University Hospital Heidelberg |
03:30 - 03:45 pm |
Computational modelling of amino acid signaling to kinase networks |
Kathrin Thedieck University Medical Center Groningen & University Oldenburg |
03:45 - 04:00 pm |
Clonal evolution in adult glioblastoma |
Verena Körber DKFZ Heidelberg |
04:00 - 04:15 pm |
Coffee break |
|
04:15 - 05:00 pm |
Der neue EU-Datenschutz: Folgen für die Forschung |
Boris Reibach, University of Oldenburg PG Data Security & Ethics |
05:00 - 07:00 pm |
Poster session 2 Even numbers |
|
05:00 - 05:30 pm |
Poster flash talks (10 talks à 3 min) |
Chair: Tanja Zeller |
05:30 - 07:00 pm |
Poster discussion |
|
06:45 - 07:30 pm |
Breakout Project Groups PG 3: Image Processing PG 4: Data security & Ethics |
Chair PG 3: Bernd Pichler Chair PG 4: Christoph Schickhardt |
07:30 - open end |
e:Med dinner & party |
Restaurant Bullerjahn Music by Maewan Forest |
Thursday, November 23, 2017
| Wed Nov 23 | Topic | Speaker |
|---|---|---|
08:30 - 09:00 am |
Welcome coffee |
|
09:00 - 10:30 am |
Session 5: Systems medicine impulse talks |
Chair: Ingo Röder, Michael Ziller |
09:00 - 09:30 am |
Closing the translational gap – integration of high-throughput data for personalized cancer treatments into clinical processes |
Oliver Kohlbacher, University of Tuebingen iD:Sem |
09:30 - 10:00 am |
Progressive fibrosis as driving force behind liver cirrhosis, liver failure and hepatocellular carcinoma |
Peter Jansen AMC Amsterdam LiSyM |
10:00 - 10:30 am |
The de.NBI network – a Bioinformatics Infrastructure in Germany for Handling Big Data in Life Sciences |
Alfred Pühler, University of Bielefeld de.NBI |
10:30 - 11:00 am |
Coffee break |
|
11:00 - 12:30 pm |
Session 6: Systems medicine approaches in clinics 1 |
Chair: Markus Nöthen, nn |
11:00 - 11:30 am |
Keynote lecture |
Erwin Böttinger, Hasso-Plattner Institute & University of Potsdam |
11:30 - 11:45 am |
Updates on the ENIGMA-Epigenetics Working Group |
Sylvane Desrivières King’s College London, United Kingdom |
11:45 - 12:00 pm |
Integrating multi-omics and multi-modality medical imaging to assess hepatocellular carcinoma patient outcome under Sorafenib treatment: A progress report of the Multiscale HCC project |
Mathew Divine University of Tübingen |
12:00 - 12:15 pm |
Multi-omics based strategy to predict graft function and personalize immunosuppressive therapy in kidney transplantation |
Nina Babel Charité Berlin |
12:15 - 02:15 pm |
Lunch break |
|
12:45 - 01:15 pm |
Company session: illumina Experiences from the 2017 e:Med Summer School How advancements in Next Generation Sequencing support Functional Genomics Research |
Karsten Rippe, DKFZ Matthias Prucha, Illumina |
01:30 - 02:00 pm |
Company session: Lexogen Gene Expression Profiling of Blood Samples: QuantSeq 3’ mRNA-Seq Library Preparation with Globin Reduction |
Lukas Paul, Lexogen GmbH |
02:15 - 03:30 pm |
Session 6: Systems medicine approaches in clinics 2 |
Chairs: Tanja Zeller, Nina Babel |
02:15 - 02:45 pm |
Pharmacogenomics: from translational research to next generation benefit-risk evaluation |
Julia Stingl, Federal Institute for Drugs and Medical Devices |
02:45 - 03:00 pm |
Anti-TNFα restores disrupted metabolic interaction of the intestinal microbiome in IBD |
Ateequr Rehman Christian-Albrechts- University, Kiel |
03:00 - 03:15 pm |
“Systems hematology” – Opportunities, benefits, and limitations |
Ingo Roeder TU Dresden |
03:15 - 03:30 pm |
How to report somatic variants in molecular tumor boards |
Tim Beissbarth University Medical Center Göttingen |
03:30 - 03:45 pm |
Poster award ceremony Closing remarks |
|
03:45 - 04:30 pm |
Coffee & snacks |
|
04:15 - 05:15 pm |
Meeting e:Med Project Committee (by invitation) |
Poster FlashTalks:
Poster FlashTalks I - Tuesday, Nov 21, 4:30 - 5:00 pm
| # | Topic | Speaker |
|---|---|---|
1 |
Spatial Gene Expression in Liver – Regulation by Autocrine and Paracrine Wnt/β-Catenin Signalling |
Uwe Benary, MDC Berlin |
2 |
Long-Term Conservation of Bioinformatics Pipelines for Systems Medicine |
Matthias Ganzinger, Heidelberg University |
3 |
ndexr – an R package to interface with the Network Data Exchange |
Florian Auer, University Medical Center Göttingen |
4 |
Comparing characteristic genomic variants allows reliable in-silico identification of Next-Generation sequenced Cancer Cell Line samples |
Raik Otto HU & Charité Berlin |
5 |
Implementing a multilayer framework for pathway data integration, analysis and visualization |
Zaynab Hammoud University Medical Center Göttingen |
6 |
A hierarchical stochastic model for bistable perception |
Stefan Albert, Goethe-University Frankfurt |
7 |
Establishment of Multi-OMICs Pathway Analysis in Human Atrial Fibrillation |
Ines Assum, Helmholtz Zentrum Munich |
8 |
Oxytocin reduces alcohol cue-reactivity in alcohol dependent rats and humans |
Anita Hansson, ZI Mannheim |
9 |
Central validation of HER2 status to determine heterogeneity of marker expression in HER2 positive gastric cancer (GC) |
Ivonne Haffner, University Hospital Leipzig |
10 |
Longitudinal analysis of cytokine profiles in community-acquired pneumonia |
Maciej Rosolowski, University Leipzig |
11 |
Cytokine X* is a component of a pathway leading to allograft damage and an early indicator of poor graft function in patients after kidney transplantation (* Patent application in preparation) |
Ellen Witte, Charité Berlin |
Poster FlashTalks I - Wednesday, Nov 22, 5:00 - 5:30 pm
| # | Topic | Speaker |
|---|---|---|
1 |
Multiscale analysis by acquisition of image and molecular fingerprints for patients under systemic treatment of hepatocellular carcinoma |
Michael Bitzer University of Tuebingen |
2 |
Harnessing the predictive potential of tumor heterogeneity via the integration of MALDI imaging data and dynamic modeling |
Haralampos Hatzikirou Helmholtz Centre for Infection Research Braunschweig |
3 |
Pre-mapping Networks for Brain Stimulation (PreNeSt) |
Tracy Erwin-Grabner University Medical Center Göttingen |
4 |
BKV clearance time correlates with the exhaustion state and T-cell receptor repertoire shape of BKV-specific T-cells in renal transplant patients with severe BKV infection |
Ulrik Stervbo University Hospital Ruhr University & Charité Berlin |
5 |
Exome sequencing of multiply affected bipolar disorder families and follow-up resequencing implicate rare variants in neuronal genes contributing to disease etiology |
Anna Maaser University of Bonn |
6 |
Metformin reverses TRAP1 mutation- associated alterations in mitochondrial function in Parkinson’s disease |
Julia Fitzgerald Hertie Institute University of Tuebingen |
7 |
Inflammatory bowel disease progression is associated to epigenetic regulators and their target genes |
Robert Häsler Christian-Albrechts- University, Kiel |
8 |
Genetic determinants of aberrant splicing events in coronary artery disease |
Baiba Vilne TU Munich |
9 |
Using Mixed Integer Linear Programming to identify regulators of telomerase expression |
Alexandra Poos, Jena University Hospital, Hans Knöll Institute Jena, DKFZ |
10 |
Common genetic variants associated with personality dimensions in the Heidelberg Cohort Study of the Elderly (HeiDE): an update |
Urs Heilbronner, University Hospital, LMU Munich |