Preliminary Virtual Program

Target OXY- Towards Targeted Drug

Treatment in Alcohol Addiction

COMMITMENT:

COMorbidity Modeling via Integrative Transfer achineleraning in MENTal illness

PeriNAA - Integrative analysis of peripheral N-acetylaspartate metabolism

Sys_CARE - Systems Medicine Investigation of Alternative Splicing in Cardiac and Renal Diseases

SysMedSUDs - A systems-medicine approach towards distinct and shared resilience and pathological mechanisms of substance use disorders

Fibromap - Spatial mapping of single cells in fibrotic diseases

Identification of complex disease associated pathways using

imputed cell type specific gene expression patterns across large patient cohorts

Reverse regression increases power

for detecting trans-eQTLs

CANCELLED - Multiscale modeling of

bone tissue regeneration: bridging the

scales to investigate potential treatment

strategies for impaired conditions

Spatial-temporal multiscale modelling and

simulation of vascular tumour growth

SyMBoD - System medicine approach for personalised bone defect treatment in patients comorbid with Type 2 diabetes

MelAutim - Systems medicine of melanoma and autoimmunity in the context of immunotherapy

iTREAT - A systems medicine approach to individualized treatment trajectories in Psoriasis and Inflammatory bowel disease

GUIDE-IBD - Molecular-medicine based therapy GUIDancE in Inflammatory Bowel Disease

LeukoSyStem - Multi-scale, single-cell systems biology of leukemia stem cells in pathogenesis and therapy

DeepLTNBC - A systems level approach to understanding changes in Triple Negative Breast Cancer heterogeneity in response to neoadjuvant chemotherapy

SASKit - Senescence-Associated Systems diagnostics Kit for cancer and stroke

Try-IBD: Multi-dimensional resolution of tryptophan-driven immune-metabolism as a novel pathophysiological principle in inflammatory bowel disease

InCa: A systems approach to dissect actionable heterotypic interactions of lung cancer cells with their microenvironment

MelBrainSys: Model-based prediction and experimental validation of novel therapeutic interventions for melanoma brain metastases

SeneSys for iLymTx: Senescence-based systems-medicine stratification for individualized lymphoma therapy

SYMPATH: SYstems Medicine of Pneumonia-aggravated ATHerosclerosis

NephrESA: Personalized Treatment of Chemotherapy Induced Anemia in Lung Carcinoma

CKDNapp: A toolbox for monitoring and tailoring treatment of chronic kidney disease patients – a personalized systems medicine approach

Innovative medical reporting of multi-dimensional molecular data in therapy guidance for infliximab treatments in IBD patients

Molecular Assessment of Iron Deficiency in Heart Failure

Shotgun lipidomics analysis of liver diseases reveals mutation-specific changes of lipidome

Integrating Proteomics into Precision Oncology

Integrating whole-brain gene expression profiles with task-specific functional magnetic resonance imaging activation during emotional face recognition

Workshop: Detecting aberrant expression in RNA-seq:

A hands-on tutorial through bioinformatics tools and workflows

1

Dissecting the molecular networks of cardiomyocyte proliferation to guide heart regeneration

2

Stable isotope-assisted metabolomics analysis of fructose metabolism in A549 lung cancer cells

3

SysMedSUDs network - Comparative and integrative computational analysis of common and specific multi-omics profiles for various SUDs

4

The prediction of adverse events in chronic kidney disease patients

5

Gene-based signature predicts future severe course of disease in hospitalized patients with community acquired pneumonia

6

Murine cytomegalovirus-specific CD8+ T cells progressively differentiate from memory to effector T cells during the acute and latent phase of infection

7

BioGraphVisart: Web-based interactive Visualization of Biological Network Graphs from graphml

8

Computational Analysis of Systems Metabolism

9

Molecular-medicine based therapy GUIDancE in Inflammatory Bowel Disease (GUIDE-IBD) SP3: eHealth-based patient-reported outcome real-time measurements

1

Model-based analysis of response and resistance factors of cetuximab treatment in gastric cancer cell lines

2

FitMultiCell: simulating and parameterization of computational models of multi-cellular processes

3

FRASER: A statistical method to detect aberrant splicing events in RNA-Seq data

4

A cell cycle dependent population dynamics model with parameter inference from scRNA-seq data

5

Modulation of individual connectivity nodes and boundary maps in healthy subjects by 10 Hz rTMS

6

Generation of isogenic human models of SYNGAP1 haploinsufficiency

7

Bringing signaling pathway knowledge into clinical systems using the HL7 FHIR standard

8

IL-6 transsignalling inhibition with OLAMKIZEPT in active IBD results in early unique molecular signatures predicting clinical remission and differentiating from remission induction by VEDOLIZUMAB or INFLIXIMAB.

9

Convergence of pathway proteome analysis and pattern recognition predicts sensitization to latest generation TRAIL therapeutics by IAP antagonism

10

Application of Convolutional Neural Networks on Omics Data to Decipher Gene Regulation