Program
The e:Med Meeting 2022 will be held at the Communication Center at DKFZ Heidelberg.
The program will include exciting news from System Medicine research, outstanding keynote speakers, space for active participation of the e:Med community and plenty of time for networking.
Preliminary Program
as at 2022-11-23:
Monday, November 28, 2022
Mon Nov 28 | Topic | Speaker |
---|---|---|
11:45 - 01:15 pm |
Welcome Supper |
|
01:15 - 01:30 pm |
Welcome Speeches |
Nicola Scholz, BMBF Michael Boutros, DKFZ Julie George and Rainer Spanagel, e:Med PK Spokespersons |
01:30 - 02:15 pm |
Keynote Lecture: Genomic Variation and Disease |
Markus Nöthen, University Hospital of Bonn |
02:15 - 02:45 pm |
Technologies in Systems Medicine |
|
02:15 - 02:30 pm |
An online knowledge base for network based mechanism exploration and drug repurposing in oncology |
Michael Hartung, University of Hamburg |
02:30 - 02:45 pm |
Shallow nanopore RNA sequencing enables transcriptome profiling for precision cancer medicine |
Cihan Erkut, DKFZ and NCT, Heidelberg |
02:45 - 03:15 pm |
Coffee Break |
|
03:15 - 03:45 pm |
Technologies in Systems Medicine |
|
03:15 - 03:30 pm |
Enhancing Neoantigen Expression in Small Cell Lung Cancer via Inhibition of Nonsense-Mediated Decay |
Lucia A. Torres Fernández, University of Cologne |
03:30 - 03:45 pm |
Stability of feature selection utilizing Graph Convolutional Neural Network and Layer-wise Relevance Propagation |
Hryhorii Chereda, University Medical Center Göttingen |
03:45 - 05:00 pm |
Poster Session I |
Topics |
03:45 - 04:15 pm |
Poster Flash Talks I |
10 Talks |
04:15 - 05:00 pm |
Poster Discussion I |
Snacks |
05:00 - 06:15 pm |
Bioinformatic Approaches in Systems Medicine |
|
05:00 - 05:15 pm |
Machine learning for treatment optimization in personalized medicine |
Stefan Schrod, University Medical Center Göttingen |
05:15 - 05:30 pm |
From black box to grey box - How to shed light on Variational Autoencoder models |
Daria Doncevic, Heidelberg University |
05:30 - 05:45 pm |
From alternative splicing events to mechanistic insights |
Olga Tsoy, University of Hamburg |
05:45 - 06:00 pm |
UnPaSt: Identification of differentially expressed biclusters for unsupervised patient stratification |
Olga Zolotareva, University of Hamburg; Technical University of Munich |
06:00 - 06:15 pm |
Personalized prediction of mortality risks in chronic kidney disease patients |
Bence Oláh, TU Braunschweig and Hannover Medical School |
06:15 - 07:00 pm |
Evening Lecture Climate: Taking Earth's Temperature |
Bjorn Stevens Max-Planck-Institute for Meteorology, Hamburg |
07:00 - open end |
Mocktails Hour Live Music and Appetizers |
Tuesday, November 29, 2022
Tue Nov 29 | Topic | Speaker |
---|---|---|
09:00 - 09:30 am |
Keynote Lecture: Individual-specific networks: wonder networks or something to wonder about? |
Kristel Van Steen, KU Leuven, Université de Liège |
09:30 - 10:15 am |
Modeling in Systems Medicine |
|
09:30 - 09:45 am |
A guide to the Computational Modeling in Biology Network (COMBINE): Navigating through specifications, mailing lists and tools |
Dagmar Waltemath, University Medicine Greifswald |
09:45 - 10:00 am |
OMIBONE: OMIcs-driven computer model of BOne regeNEration for personalized treatment |
Mahdi Jaber, Universitätsmedizin Berlin |
10:00 - 10:15 am |
Improving our Mechanistic Understanding of Cell Cycle Dynamics |
Paul Lang, University of Oxford |
10:15 - 10:30 am |
Company Talk |
|
10:30 - 11:00 am |
Coffee Break |
|
11:00 - 11:45 am |
Modeling in Systems Medicine |
|
11:00 - 11:15 am |
Basis of molecular-medicine based reporting in IBD therapy guidance – Experiences from the GUIDE-IBD trial |
Florian Tran University Hospital Schleswig Holstein, Kiel |
11:15 - 11:30 am |
Multi-stage model facilities assessment of the spread of breast cancer metastasis |
Jan Hasenauer, University of Bonn |
11:30 - 11:45 am |
Elucidating the temporal regulation of IKK/ NF-kB signaling upon genotoxic stress by computational modeling |
Fabian Konrath, Jana Wolf, Max-Delbrück- Center, Berlin |
11:45 - 12:15 pm |
PG Networking: - PG Data Security and Ethics - PG Modeling of Disease Process - PG MS- and NMR-based Omics |
Project Group Members: - Jan Baumbach, Stephanie Witt - Jana Wolf, Sara Checa - Stefan Kalkhof, Helena Zacharias |
12:15 - 01:30 pm |
Lunch break |
|
01:30 - 02:00 pm |
Keynote Lecture: Redefining diseases for precision diagnosis and drug repurposing |
Harald HHW Schmidt, Maastricht University |
02:00 - 02:45 pm |
Systems Medicine of Diseases |
|
02:00 - 02:15 pm |
Dysregulated Energy Balance Impairs Scaffold-Guided Bone Regeneration In Type 2 Diabetes |
Daniela Bastos Dias, Universitätsmedizin Berlin |
02:15 - 02:30 pm |
Early molecular signatures of therapeutic response to vedolizumab therapy in Inflammatory Bowel Disease patients identified using a longitudinal multi-omics approach |
Neha Mishra, Christian-Albrechts- University Kiel; University Medical Center Schleswig-Holstein |
02:30 - 02:45 pm |
Network-based enrichment analysis of molecular data from large-scale disease maps |
Matti Hoch, University of Rostock |
02:45 - 03:15 pm |
Coffee Break |
|
03:15 - 03:45 pm |
Systems Medicine of Diseases |
|
03:15 - 03:30 pm |
Stromaless organoids of mammary ductal carcinoma in situ suggest that myoepithelial cells are an integral part of premalignant breast lesions |
Stefan Florian, Universitätsmedizin Berlin |
03:30 - 03:45 pm |
A step closer to Personalized Medicine: the application of a gnotobiotic mouse model to investigate the role of the microbiome in IBD-therapy |
Martina Guggeis, Kiel University |
03:45 - 4:00 pm |
Olink Proteomics for systems biology: Rise of Precision Proteomics in Integrated Multiomics |
Rutuja Patwardhan Company Talk Olink |
04:00 - 05:15 pm |
Poster Session II |
|
04:00 - 04:30 pm |
Poster Flash Talks II |
10 Talks |
04:30 - 05:15 pm |
Poster Discussion II |
Snacks |
05:15 - 05:45 pm |
Keynote: Decoding the developing human immune system |
Muzlifah Haniffa, Sanger Institute |
05:45 - 06:30 pm |
Systems Medicine of Diseases |
|
05:45 - 06:00 pm |
Targeting network communication to inhibit melanoma brain metastatic growth in vivo |
Matthia A. Karreman, Universitätsklinik Heidelberg, DKFZ, Heidelberg |
06:00 - 06:15 pm |
Tryptophan catabolism associates with severity and long-term disease control in chronic inflammatory diseases |
Danielle Harris, Universitätsklinikum Schleswig-Holstein |
06:15 - 06:30 pm |
Disease stage-related cellular and molecular markers identified in patients with idiopathic pulmonary fibrosis |
Jiangyan Yu, University of Bonn |
06:30 open end |
Conference Dinner and Networking |
Bräustadl, Heidelberg |
Wednesday, November 30, 2022
Wed Nov 30 | Topic | Speaker |
---|---|---|
09:00 - 09:30 am |
Keynote Lecture: Assessing intra-tumoral heterogeneity in genetically simple tumors - what can we learn? |
Pfister Stefan, KiTZ, DKFZ, DKTK, Heidelberg |
09:30 - 10:15 am |
Translational Approaches in Systems Medicine |
|
09:30 - 09:45 am |
Patient derived organoids demonstrate hallmark characteristics of small cell lung cancer for therapeutic screening and functional analyses |
Joshua D'Rozario, University Hospital of Cologne |
09:45 - 10:00 am |
Integration of systems, network and machine learning modeling to select tumor-associated antigens for immunotherapy in metastatic melanoma |
Julio Vera, UK Erlangen; FAU Erlangen- Nürnberg |
10:00 - 10:15 am |
Senescence systems medicine for individualized lymphoma therapy |
Clemens A. Schmitt, Charité Berlin |
10:15 - 10:30 am |
The Use of Novel Proteograph Technology to facilitate in-depth exploration of the Proteome at Scale and Speed. |
Richard Broadhead Company Talk Life & Brain |
10:30 - 11:00 am |
Coffee Break |
|
11:00 - 11:45 am |
Translational Approaches in Systems Medicine |
|
11:00 - 11:15 am |
Transcriptomic signatures in AUD - a translational approach |
Marion Friske, Central Institute of Mental Health, Mannheim |
11:15 - 11:30 am |
Immunogenicity of primary tumor cell lines derived from melanoma brain metastases |
Nusrat Yasmin, Technische Universität Dresden |
11:30 - 11:45 am |
Activation of metaphyseal progenitor cells in bone marrow fibrosis drives the fibrotic transformation via a Wnt axis |
Bella Banjanin, Erasmus MC |
11:45 - 12:00 pm |
Breaking News: Spatial cellular networks from omics data |
Michael Altenbuchinger, University Medical Center Göttingen |
12:00 - 12:15 pm |
Highly accurate (and affordable!) long reads in biomedical research |
Thea Ziegler Company Talk PacBio |
12:15 - 01:15 pm |
Lunch |
|
01:15 - 01:45 pm |
Molecular Disease Board From neoplasms to non-clonal diseases |
Daniel Huebschmann Peter Horak Wolfgang Merkt Philip Rosenstiel |
01:45 - 02:15 pm |
Award Ceremony & Closing Remarks |
e:Med Poster and Creative Award |
02:15 - 03:15 pm |
Project Committee Meeting |
By invitation only |